Sonorités du Graal

L-GRAAL: Lagrangian graphlet-based network aligner

MOTIVATION Discovering and understanding patterns in networks of protein-protein interactions (PPIs) is a central problem in systems biology. Alignments between these networks aid functional understanding as they uncover important information, such as evolutionary conserved pathways, protein complexes and functional orthologs. A few methods have been proposed for global PPI network alignments, ...

Project Graal: Towards Operational Architecture Alignment

This paper presents a framework for architecture alignment that can be positioned between approaches for software architecture, which concern software artefacts only, and strategic alignment models, which have a business focus. The framework is currently applied in case study research to find alignment patterns used in practice. First results presented in this paper indicate that the framework ...

An Empirical Study on Deoptimization in the Graal Compiler

Managed language platforms such as the Java Virtual Machine or the Common Language Runtime rely on a dynamic compiler to achieve high performance. Besides making optimization decisions based on the actual program execution and the underlying hardware platform, a dynamic compiler is also in an ideal position to perform speculative optimizations. However, these tend to increase the compilation co...

Graal: A Toolkit for Query Answering with Existential Rules

This paper presents Graal, a java toolkit dedicated to ontological query answering in the framework of existential rules. We consider knowledge bases composed of data and an ontology expressed by existential rules. The main features of Graal are the following: a basic layer that provides generic interfaces to store and query various kinds of data, forward chaining and query rewriting algorithms...

Project-Team GRAAL Algorithms and Scheduling for Distributed Heterogeneous Platforms